Review
Published
From cooperation to collapse: the diet-microbiota-host gene triad in disease and aging
Shreya Bhattacharjee · Arnab Mukhopadhyay
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1872481
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Articles
Every article on Frontiers is peer reviewed, permanently archived and free to read.
Showing 175 articles
Original Research
Published
Seasonal dynamics of the gut microbiota in Apis mellifera ligustica: a two-year longitudinal study
Massimo Iorizzo · Gianfranco Pannella · Mariantonietta Succi · Sonia Ganassi · Dalila Di Criscio · Cosimo Tedino · Gianluca Albanese · Antonio De Cristofaro
Frontiers in Insect Science
doi 10.3389/finsc.2026.1920906
Review
Published
Omics-guided aquafeed innovation: raw ingredients to functional nutrition
Mir Ishfaq Nazir · Pankaj Gargotra · Oyas Asimi · Irfan Ahmad Bhat · Gowhar Iqbal · Mukilan Aakash
Frontiers in Fish Science
doi 10.3389/frish.2026.1856912
Original Research
Published
Gut microbiota signatures differentiate trajectory-defined response phenotypes and predict self-management outcomes in irritable bowel syndrome
Jie Chen · Aolan Li · Weizi Wu · Wanli Xu · Tingting Zhao · Angela R. Starkweather · Leonel Rodriguez · Ming-Hui Chen · Xiaomei S. Cong
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1884540
Original Research
Published
Placental and maternal microbiome adaptations in a preeclamptic-like mouse model
Kalie F. Beckers · Christopher J. Schulz · Juliet P. Flanagan · Chin-Chi Liu · Gary W. Childers · Isabella N. Faulkner · Jenny L. Sones
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1881824
Editorial
Published
Editorial: Bacteria’s role in soil health and microbiomes
Anil Raghavendra · Samuel Bickel
Frontiers in Bacteriology
doi 10.3389/fbrio.2026.1921131
Original Research
Published
Perinatal antibiotics in a db/db mouse model impact obesity and hyperglycemia in a microbiome-dependent manner
Noelle Curtis-Joseph · Audra Laubi · Melanie Ortiz-Alvarez de la Campa · Peter Belenky
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1750320
Original Research
Published
Cross study reveals ubiquitous bacterial taxa across legume rhizospheres
Gastón Azziz · Patricia Vaz Jauri
Frontiers in Soil Science
doi 10.3389/fsoil.2026.1861827
Original Research
Published
Analysis of 16S rRNA to evaluate taxonomic differences between salivary and intratumoral microbiota in patients affected by oral squamous cell carcinoma: a single-center pilot study
Edoardo Mandalà · Martina Coppini · Rodolfo Mauceri · Mariangela Pizzo · Giovanni M. Giammanco · Giuseppina Campisi · Celestino Bonura
Frontiers in Bacteriology
doi 10.3389/fbrio.2026.1863255
Mini Review
Published
Gut microbiome modulation for military resilience and performance
Emma F. Murphy · Iain Templeman · Joanna Rimmer · Sarah V. Harding
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1828981
Review
Published
Functional genetic signatures of the gut microbiome in cardiometabolic diseases: mechanisms and translational opportunities
Martin Nganga Muigano
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1847345
Original Research
Published
The role of gut microbiome disruption in the development of metabolic dysfunction-associated kidney disease
Michał Witkowski · Jarosław Przybyciński · Bartosz Wojciuk · Wiktor Czaja · Natalia Gołembiewska · Edyta Gołembiewska
Acta Biochimica Polonica
doi 10.3389/abp.2026.16436
1,289 views
Original Research
Published
A real-world assessment of healthcare resource utilization following IBS-Smart ® and Trio-Smart ® testing in patients with suspected irritable bowel syndrome
Leonard Weinstock · William B. Salt · Lynn Cherry · Christopher Tyson · Raf Magar
Frontiers in Gastroenterology
doi 10.3389/fgstr.2026.1681818
Mini Review
Published
Inflammation, infection, and immune dysregulation in chronic kidney disease: translational and epidemiological perspectives
Aminu Shittu
Frontiers in Nephrology
doi 10.3389/fneph.2026.1919658
Review
Published
Rumen mycobiome dynamics and dairy productivity: functional contributions of fungi to milk yield in bovine ruminants
Gurpreet Singh · Lavika · Nandini · Abhay · Deepika · Nishchal Thakur · Robin Kaura · Sukhraj Kaur · Harvinder Singh Saini · Sagar Khulape · Anil Kumar Puniya · Harmeet Singh Dhillon
Frontiers in Fungal Biology
doi 10.3389/ffunb.2026.1878257
Correction
Published
Correction: Improving DirectLiNGAM for high-dimensional microbiome data: roots screening and eBIC based model selection
Francesco Canonaco · Enzo Acerbi · Fabio Stella
Frontiers in Systems Biology
doi 10.3389/fsysb.2026.1929002
Clinical Trial
Published
Long-term Impact of Intravitreal Injections on the ocular surface; a 2-year follow-up study
Agni Malmin · Markus Vicente Tørud Olsen · Vilde Marie Thomseth · Inga-Britt Kjellevold Haugen · Tor Paaske Utheim · Vegard Asgeir Forsaa
Frontiers in Ophthalmology
doi 10.3389/fopht.2026.1829818
Original Research
Published
Shotgun metagenomic analysis reveals taxonomic and functional alterations in the gut microbiome across prodromal and symptomatic Lewy body disease
Xiaowei Zhao · Stuart J. McCarter · Vinod K. Gupta · Kiera M. Grant · Erik K. St. Louis · Kejal Kantarci · Rodolfo Savica · Max Hill · Helen E. Vuong · Christopher Staley · Bradley F. Boeve · Owen A. Ross · Levi M. Teigen · Jaeyun Sung
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1834726
Perspective
Published
Modulating the human gut microbiome-host system: a new drug discovery paradigm
Gonzalo Colmenarejo
Frontiers in Drug Discovery
doi 10.3389/fddsv.2026.1898583
Original Research
Published
Comparative metagenomic analysis of gut microbiota in Anacanthotermes turkestanicus and A. ahngerianus reveals diet- and habitat-driven functional divergence
Ulugbek Togaev · Vartika Mathur · Aziza Rakhmonkulova · Surbhi Agarwal · Aarav Mathur · Shuhrat Turageldiyev · Rasul Ruzmetov · Abboskhon S. Turaev · Zaitjan Tillyabaev · Alimjan Matchanov · David Sillam-Dussès
Frontiers in Insect Science
doi 10.3389/finsc.2026.1807673
Perspective
Published
The Remission Therapy Inquiry-Based Research Model (RIRM): a conceptual framework for mechanistic hypothesis generation
Pichit Suvanprakorn · Krit Pongpirul
Frontiers in Systems Biology
doi 10.3389/fsysb.2026.1835804
Systematic Review
Published
Global variations and implications of microbiome communities in Ixodidae ticks: a systematic review and quality assessment
Tapiwanashe Annamary Mhlanga · Alicia Pillay · Samson Mukaratirwa
Frontiers in Bacteriology
doi 10.3389/fbrio.2026.1868676
Review
Published
Artificial intelligence in soil microbiome-driven agriculture: from practical limits to a translational roadmap
Acharya Balkrishna · Priyanka Chaudhary · Shelly Singh · Anishka Saini · Aditi Kumari · Khushi Ishika Mahato · Vedpriya Arya
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1860559
Mini Review
Published
False smut of rice: integrating molecular pathogenicity and epidemiology for next-generation disease management
K. Nishmitha · Sudeep Adhikari · Pankaj Kumar Mishra · Suryakant Manik · Hem Chandra Lal · Lham Dorjee
Frontiers in Fungal Biology
doi 10.3389/ffunb.2026.1875221
Original Research
Published
Metataxonomic analysis revealed the lack of long-term effects of microbial soil amendments on apple rhizosphere microbial community structure
Greg Deakin · Tom Passey · Georgina Fagg · Louisa Robinson-Boyer · Samuel Bickel · Xiangming Xu
Frontiers in Horticulture
doi 10.3389/fhort.2026.1821219
Review
Published
Mechanisms of action and biocontrol potential of Trichoderma against Alternaria in horticultural crops: a review
Rafi Khalido · Nia Rossiana · Dedat Prismantoro · Thomas Argyarich Jefferson · Malvin Albert · Nur Syafikah Abdullah · Budi Irawan · Mia Miranti · Wiwiek Harsonowati · Ravindra Chandra Joshi · Febri Doni
Frontiers in Fungal Biology
doi 10.3389/ffunb.2026.1851718
Original Research
Published
Improving DirectLiNGAM for high-dimensional microbiome data: roots screening and eBIC based model selection
Francesco Canonaco · Enzo Acerbi · Fabio Stella
Frontiers in Systems Biology
doi 10.3389/fsysb.2026.1835323
Original Research
Published
Nasal cavity microbial makeup and the influence on psychiatric symptoms following fire exposure in firefighters
Paul Grunsted · Chao Xu · Amanda Janitz · Jessica Reese · Janis Campbell · Tasha M. Santiago-Rodriguez · Sara J. Javornik Cregeen · Joseph F. Petrosino · Jooyeon Hwang
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1832151
Review
Published
Understanding of the interaction of Lactobacillus in fermented food and beverages: targeting food safety and new foods
Ritisha Goel · Rajni Goyal · Taman Moria · Richa Arora · Prakash Kumar Sarangi · Anuj K. Chandel
Frontiers in Industrial Microbiology
doi 10.3389/finmi.2026.1846356
Perspective
Published
Glyphosate: North America's toxic food crops and the enduring legacy of disease
J. A. Barnett · D. L. Gibson
Frontiers in Environmental Health
doi 10.3389/fenvh.2026.1863758
Review
Published
The microbiome and its impact on the epigenome in cancer
Akhil Kapoor · Rohit Kumar · Anuj Gupta · Bipinesh Sansar · Bal Krishna Mishra · Mahesh Chaudhary · Archi Rungta · Gopalakrishna Kallapura · Kumar Prabhash
Frontiers in Epigenetics and Epigenomics
doi 10.3389/freae.2026.1857307
Review
Published
Fecal microbiota transplantation: from empirical remedy to precision medicine
Junsheng Zhao · Yiming Fan · Keda Yang · Hainv Gao
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1863308
Correction
Published
Correction: Fecal microbiota transplantation promotes gut microbiome recovery in pediatric hematopoietic stem cell transplant recipients
María Florencia Fernandez · Abigail Stricker · Adriana Bottero · Laura Busquet · Carlos Waldbaum · Fabiana López Mingorance · Raúl Martinez Patetta · Ignacio Toer · Ana Juliá · Andrea Mangano
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1904862
Original Research
Published
Variation in cloacal microbiota of Canada goose (Branta canadensis) across rural and urban areas in Illinois, USA
Daniel B. Raudabaugh · Sara Villazan Perez-Girones · Nelda A. Rivera · Tooba Latif · Evan W. London · Nicole F. Pietrunti · Willian M. Brown · Nohra E. Mateus-Pinilla · Auriel M. V Fournier
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1820309
Systematic Review
Published
Leveraging artificial intelligence for analysis of the gut microbiome for dementia diagnosis: a scoping review and discussion
Laya Krishnan · Gaurie Gunasekaran · Tamanna Dhore · Alexa Lauinger · Vijaya Kolachalama · Suguna Pappu
Frontiers in Dementia
doi 10.3389/frdem.2026.1865441
Original Research
Published
Microbial community characterization of multi-crop growouts in the XROOTS aeroponic–hydroponic system on the International Space Station
Christina L. M. Khodadad · Cory J. Spern · Mary E. Hummerick · Jennifer L. Gooden · Cristiana J. Morales · Raymond M. Wheeler · Orlando Melendez · Robert Morrow · John Wetzel · Ye Zhang
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1779816
Review
Published
Exploring the gut–brain axis: dietary influences on Alzheimer’s disease pathogenesis
Samira R. Mansour · Menna A. Khalaf · Mostafa A. Moustafa · Mardies A. Moustafa · AbdelRaouf A. Moustafa
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1639904
Original Research
Published
Acute myocardial infarction induces sex-specific, time-dependent remodeling of the gut microbiome and intestinal immune compartment in retired breeder C57BL/6N mice
Eszter Pal · Neda Omidi Arjenaki · Yao Lu · Jianguo Xia · Lorraine Chalifour
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1818652
Original Research
Published
Fecal microbiota transplantation promotes gut microbiome recovery in pediatric hematopoietic stem cell transplant recipients
María Florencia Fernandez · Abigail Stricker · Adriana Bottero · Laura Busquet · Carlos Waldbaum · Fabiana López Mingorance · Raúl Martinez Patetta · Ignacio Toer · Ana Juliá · Andrea Mangano
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1849762
Perspective
Published
Predictive modeling for cervical cancer: existing AI approaches and the emerging role of vaginal microbiome
Michelle Gomes · Zonglun Li · Adeola Olaitan · Aleksandra Gentry-Maharaj
Frontiers in Network Physiology
doi 10.3389/fnetp.2026.1799486
Original Research
Published
Altered early-life gut microbiota in offspring of pregnancies complicated by CHD-associated pulmonary hypertension
Yiyang Han · Haofeng Zhang · Jun Zhang
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1785707
Original Research
Published
Age-specific early-life gut microbiome associations with eczema and food allergies during early immune development
Harold Nunez · Timothy J. Straub · Nabeel Imam · David Goad · Noel T. Mueller · Ruben A. T. Mars · Cheryl Sew Hoy · Trillitye Paullin · Kimberley V. Sukhum
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1804117
Review
Published
The interplay between bile acid metabolism and gut microbiome in biliary tract cancers
Ifeoma Ike · Farzad Teymouri · Christiana Crook · Sofia Guzman · Max Hazeltine · Dani Castillo · Daneng Li · Gagandeep Brar
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1774429
Review
Published
Microbial interventions in rice rhizosphere engineering: from soil microbiome manipulation to yield stability
Qudrat Ullah · Waqas Haider · Muhammad Usama
Frontiers in Industrial Microbiology
doi 10.3389/finmi.2026.1832866
Review
Published
Engineering yeast for sustainable production of sterols, steroids, and bile acids: advances, strategies, and future directions
Hee Yeon Song · Ga Won Lee · Young Hoon Jung · Jae Won Lee
Frontiers in Chemical Engineering
doi 10.3389/fceng.2026.1833599
Original Research
Published
Dietary transition to an Indigenous Greenlandic diet induces instant shifts in gut microbiota composition – a pilot intervention study
Mads B. W. Bjørnsen · Katie M. Bourke · Catherine Stanton · R. Paul Ross · Anders J. Hansen · Aviaja L. Hauptmann
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1832705
Review
Published
Methods for examining immune and skin microbiome associations with dermatomycoses in reptiles: a review
Natalie T. Haydt · Lorin A. Neuman-Lee
Frontiers in Amphibian and Reptile Science
doi 10.3389/famrs.2026.1812456
Mini Review
Published
Computational and multi-omics systems biology for precision microbiome therapeutics
Ahmed Dewan · Maria Teresa Mascellino
Frontiers in Microbiomes
doi 10.3389/frmbi.2026.1842701